Hello,
Heres just a thought without going the machine shop rout or buying a new crank.
Apply a small amount of valve lapping compound to the rod journal, and rod cap, assemble the rod and cap with the rod bolts slightly loose and rotate by hand a bit to remove several tenths i.e. .0001". Maybe an electric hand drill could be used to slowly rotate the crank?
Obviously you'd have to throughly clean everything prior to final assembly.
OK after thinking about this (and drinking a second cup of coffee,,,lol), valve lapping compound may be too coarse, but there are "cleaner" auto waxes that contain a mild abrasive that might be a better choice. There also is a product called Liquid Ebony", that is a super fine rubbing compound that removes swirl marks left by coarser rubbing compounds.
Regards
Jeff